Sequence Similarity Clusters for the Entities in PDB 1EJ6

Entity #1 | Chains: A
LAMBDA2 protein, length: 1289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30368
95 % 1 2 25184
90 % 1 2 24352
70 % 1 2 22154
50 % 1 2 19188
40 % 1 2 17100
30 % 1 2 14696
Entity #2 | Chains: B,C
LAMBDA1 protein, length: 1275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16242
95 % 1 2 15215 Flexibility: Medium
Max RMSD: 3.8, Avg RMSD: 3.8
PDBFlex
90 % 1 2 14932
70 % 1 2 14007
50 % 1 2 12435
40 % 1 2 11275
30 % 1 4 6908
Entity #3 | Chains: D,E
SIGMA2 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14591
95 % 1 2 13820
90 % 1 2 13600
70 % 1 2 12794
50 % 1 2 11399
40 % 1 2 10338
30 % 2 3 3233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.