Sequence Similarity Clusters for the Entities in PDB 1EJ6

Entity #1 | Chains: A
LAMBDA2 protein, length: 1289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31010
95 % 1 2 25684
90 % 1 2 24814
70 % 1 2 22541
50 % 1 2 19522
40 % 1 2 17385
30 % 1 2 14932
Entity #2 | Chains: B,C
LAMBDA1 protein, length: 1275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16613
95 % 1 2 15513 Flexibility: Medium
Max RMSD: 3.8, Avg RMSD: 3.8
PDBFlex
90 % 1 2 15234
70 % 1 2 14295
50 % 1 2 12680
40 % 1 2 11490
30 % 1 4 7030
Entity #3 | Chains: D,E
SIGMA2 protein, length: 418 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 14913
95 % 1 2 14093
90 % 1 2 13871
70 % 1 2 13050
50 % 1 2 11624
40 % 1 2 10541
30 % 2 3 3301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures