Sequence Similarity Clusters for the Entities in PDB 1EIY

Entity #1 | Chains: C
TRNA(PHE) rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 8162
95 % 8 9 8224 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 8 9 8148
70 % 8 9 7855
50 % 8 9 7211
40 % 14 15 2939
30 % 14 15 2705
Entity #3 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5633
95 % 11 12 5899 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 11 12 5914
70 % 11 12 5784
50 % 11 12 5454
40 % 11 12 5100
30 % 19 20 2168

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JJC 2 B PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN BETA CHAIN 274 6.1.1.20 | Details
2 1B7Y 2 B PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) 274 6.1.1.20 | Details
3 1PYS 2 B PHENYLALANYL-TRNA SYNTHETASE 274 6.1.1.20 | Details
4 1B70 2 B PHENYLALANYL-TRNA SYNTHETASE BETA SUBUNIT 274 6.1.1.20 | Details
5 4TVA 2 B Phenylalanine--tRNA ligase beta subunit 274 6.1.1.20 | Details
6 2ALY 2 B Phenylalanyl-tRNA synthetase beta chain 274 6.1.1.20 | Details
7 3TEH 2 B Phenylalanyl-tRNA synthetase beta chain 274 6.1.1.20 | Details
8 2AMC 2 B Phenylalanyl-tRNA synthetase beta chain 274 6.1.1.20 | Details
9 2AKW 2 B Phenylalanyl-tRNA synthetase beta chain 274 6.1.1.20 | Details
10 2IY5 2 B PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 274 6.1.1.20 | Details
11 1EIY 3 B PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 274 6.1.1.20 | Details
12 3HFZ 2 B Phenylalanyl-tRNA synthetase beta chain 274 6.1.1.20 | Details