Sequence Similarity Clusters for the Entities in PDB 1EIY

Entity #1 | Chains: C
TRNA(PHE) rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 8144
95 % 8 9 8206 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 8 9 8132
70 % 8 9 7843
50 % 8 9 7200
40 % 14 15 2932
30 % 14 15 2702
Entity #3 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5621
95 % 11 12 5895 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 11 12 5910
70 % 11 12 5777
50 % 11 12 5446
40 % 11 12 5092
30 % 19 20 2167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JJC 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN ALPHA CHAIN 274 6.1.1.20 | Details
2 1B7Y 1 A PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) 274 6.1.1.20 | Details
3 1PYS 1 A PHENYLALANYL-TRNA SYNTHETASE 274 6.1.1.20 | Details
4 1B70 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA SUBUNIT 274 6.1.1.20 | Details
5 4TVA 1 A Phenylalanine--tRNA ligase alpha subunit 274 6.1.1.20 | Details
6 3TEH 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details
7 2IY5 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
8 1EIY 2 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
9 3HFZ 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details