Sequence Similarity Clusters for the Entities in PDB 1EIY

Entity #1 | Chains: C
TRNA(PHE) rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 8542
95 % 8 9 8605 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 8 9 8511
70 % 8 9 8213
50 % 8 9 7492
40 % 14 15 3043
30 % 14 15 2809
Entity #3 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5920
95 % 11 12 6189 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 11 12 6179
70 % 11 12 6024
50 % 11 12 5664
40 % 11 12 5285
30 % 19 20 2244

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JJC 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN ALPHA CHAIN 274 6.1.1.20 | Details
2 1B7Y 1 A PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) 274 6.1.1.20 | Details
3 1PYS 1 A PHENYLALANYL-TRNA SYNTHETASE 274 6.1.1.20 | Details
4 1B70 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA SUBUNIT 274 6.1.1.20 | Details
5 4TVA 1 A Phenylalanine--tRNA ligase alpha subunit 274 6.1.1.20 | Details
6 3TEH 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details
7 2IY5 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
8 1EIY 2 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
9 3HFZ 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details