Sequence Similarity Clusters for the Entities in PDB 1EIY

Entity #1 | Chains: C
TRNA(PHE) rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PHENYLALANYL-TRNA SYNTHETASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 8734
95 % 8 9 8779 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 8 9 8681
70 % 8 9 8367
50 % 8 9 7619
40 % 14 15 3097
30 % 14 15 2852
Entity #3 | Chains: B
PHENYLALANYL-TRNA SYNTHETASE protein, length: 785 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 6047
95 % 11 12 6320 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 11 12 6306
70 % 11 12 6147
50 % 11 12 5764
40 % 11 12 5377
30 % 19 20 2280

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1JJC 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN ALPHA CHAIN 274 6.1.1.20 | Details
2 1B7Y 1 A PROTEIN (PHENYLALANYL-TRNA SYNTHETASE) 274 6.1.1.20 | Details
3 1PYS 1 A PHENYLALANYL-TRNA SYNTHETASE 274 6.1.1.20 | Details
4 1B70 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA SUBUNIT 274 6.1.1.20 | Details
5 4TVA 1 A Phenylalanine--tRNA ligase alpha subunit 274 6.1.1.20 | Details
6 3TEH 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details
7 2IY5 1 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
8 1EIY 2 A PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN 274 6.1.1.20 | Details
9 3HFZ 1 A Phenylalanyl-tRNA synthetase alpha chain 274 6.1.1.20 | Details