Sequence Similarity Clusters for the Entities in PDB 1EIF

Entity #1 | Chains: A
EUKARYOTIC TRANSLATION INITIATION FACTOR 5A protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46440
95 % 2 2 34835 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 2 2 33258
70 % 2 2 29615
50 % 3 4 11081
40 % 3 4 10034
30 % 3 4 8749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures