Sequence Similarity Clusters for the Entities in PDB 1EI3

Entity #1 | Chains: A,D
FIBRINOGEN protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31270
95 % 2 2 15354 Flexibility: Medium
Max RMSD: 4.2, Avg RMSD: 3.3
PDBFlex
90 % 2 2 15066
70 % 2 2 14112
50 % 2 2 12503
40 % 2 2 11320
30 % 2 2 9837
Entity #2 | Chains: B,E
FIBRINOGEN protein, length: 464 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16945
95 % 2 2 15507 Flexibility: Medium
Max RMSD: 4.3, Avg RMSD: 3.5
PDBFlex
90 % 2 2 15207
70 % 2 2 14221
50 % 4 4 5879
40 % 4 4 5492
30 % 4 4 4945
Entity #3 | Chains: C,F
FIBRINOGEN protein, length: 409 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32587
95 % 2 2 15822 Flexibility: Medium
Max RMSD: 4.7, Avg RMSD: 3.6
PDBFlex
90 % 2 2 15516
70 % 2 2 14487
50 % 4 4 4981
40 % 4 4 4708
30 % 5 5 3357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.