Sequence Similarity Clusters for the Entities in PDB 1EI1

Entity #1 | Chains: A,B
DNA GYRASE B protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42282
95 % 7 10 6824 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 7 10 6802
70 % 7 10 6605
50 % 8 13 3513
40 % 10 24 992
30 % 11 25 948

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4WUB 1 A DNA gyrase subunit B N-terminal 43 kDa fragment, UNP residues 2-393 562 5.99.1.3 | Details
2 4PRX 1 A GyrB UNP residues 2-392 562 5.99.1.3 | Details
3 5J5P 1 A, B DNA topoisomerase 4 subunit B ATPase N-terminal domain, residues 1-402 1313 5.99.1.3 | Details
4 4WUC 1 A DNA gyrase subunit B N-terminal 43 kDa fragment, UNP residues 2-393 562 5.99.1.3 | Details
5 4XTJ 1 A DNA gyrase subunit B 562 5.99.1.3 | Details
6 4WUD 1 A DNA gyrase subunit B N-terminal 43 kDa fragment, UNP residues 2-393 562 5.99.1.3 | Details
7 4PRV 1 A GyrB UNP residues 2-392 562 5.99.1.3 | Details
8 1EI1 1 A, B DNA GYRASE B N-TERMINAL 43 KDA FRAGMENT 562 5.99.1.3 | Details
9 4ZVI 1 A DNA gyrase subunit B N-terminal domain, residues 16-392 562 5.99.1.3 | Details
10 4URL 1 A, B DNA TOPOISOMERASE IV, B SUBUNIT KIBDELOMYCIN 43KDA N-TERMINAL DOMAIN, RESIDUES 1-406 1280 5.99.1 | Details
11 4PU9 1 A GyrB UNP residues 2-392 562 5.99.1.3 | Details
12 5J5Q 1 A, B, C, D DNA topoisomerase 4 subunit B 1313 5.99.1.3 | Details
13 5L3J 1 A DNA gyrase subunit B N-terminal domain, UNP residues 15-392 562 5.99.1.3 | Details