Sequence Similarity Clusters for the Entities in PDB 1EHL

Entity #1 | Chains: A
5'-(D(5HT)P*(6-4)T)-3' dna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: L
ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39688
95 % 86 145 146 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 93 155 148
70 % 981 2264 1
50 % 2007 4587 1
40 % 2007 4587 1
30 % 2254 5394 1
Entity #3 | Chains: H
ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39382
95 % 1 2 30139
90 % 2 9 6862
70 % 973 2222 2
50 % 2008 4587 1
40 % 2008 4587 1
30 % 2255 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.