Sequence Similarity Clusters for the Entities in PDB 1EHK

Entity #1 | Chains: A
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 562 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 15 3672
95 % 8 36 1519 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1547
70 % 8 36 1559
50 % 8 36 1617
40 % 8 36 1626
30 % 8 36 1607
Entity #2 | Chains: B
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 29 1537
95 % 8 36 1580 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1611
70 % 8 36 1615
50 % 8 36 1669
40 % 8 36 1682
30 % 8 36 1651
Entity #3 | Chains: C
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 36 1191
95 % 8 36 1597 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 8 36 1628
70 % 8 36 1634
50 % 8 36 1681
40 % 8 36 1695
30 % 8 36 1667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures