Sequence Similarity Clusters for the Entities in PDB 1EHK

Entity #1 | Chains: A
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 562 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 15 3525
95 % 8 36 1461 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1490
70 % 8 36 1498
50 % 8 36 1555
40 % 8 36 1569
30 % 8 36 1547
Entity #2 | Chains: B
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 29 1480
95 % 8 36 1525 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1556
70 % 8 36 1553
50 % 8 36 1600
40 % 8 36 1617
30 % 8 36 1585
Entity #3 | Chains: C
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 36 1142
95 % 8 36 1543 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 8 36 1574
70 % 8 36 1571
50 % 8 36 1611
40 % 8 36 1630
30 % 8 36 1601

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.