Sequence Similarity Clusters for the Entities in PDB 1EHK

Entity #1 | Chains: A
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 562 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 15 3609
95 % 8 36 1494 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1525
70 % 8 36 1534
50 % 8 36 1586
40 % 8 36 1601
30 % 8 36 1579
Entity #2 | Chains: B
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 29 1515
95 % 8 36 1558 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1593
70 % 8 36 1593
50 % 8 36 1640
40 % 8 36 1658
30 % 8 36 1626
Entity #3 | Chains: C
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 36 1168
95 % 8 36 1575 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 8 36 1610
70 % 8 36 1609
50 % 8 36 1651
40 % 8 36 1670
30 % 8 36 1642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures