Sequence Similarity Clusters for the Entities in PDB 1EHK

Entity #1 | Chains: A
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 562 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 22 2679
95 % 8 36 1628 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1663
70 % 8 36 1667
50 % 8 36 1707
40 % 8 36 1687
30 % 8 36 1637
Entity #2 | Chains: B
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 36 1306
95 % 8 36 1547 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 36 1577
70 % 8 36 1601
50 % 8 36 1647
40 % 8 36 1637
30 % 8 36 1616
Entity #3 | Chains: C
BA3-TYPE CYTOCHROME-C OXIDASE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 36 1312
95 % 8 36 1549 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.3
PDBFlex
90 % 8 36 1579
70 % 8 36 1604
50 % 8 36 1649
40 % 8 36 1638
30 % 8 36 1618

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures