Sequence Similarity Clusters for the Entities in PDB 1EHH

Entity #1 | Chains: A,B
AGGLUTININ ISOLECTIN VI protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29849
95 % 4 6 9954 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 4 6 9832
70 % 4 6 9343
50 % 4 6 8453
40 % 7 9 5285
30 % 7 9 4749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures