Sequence Similarity Clusters for the Entities in PDB 1EGV

Entity #1 | Chains: A,L
PROPANEDIOL DEHYDRATASE protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 3211
95 % 2 8 3955 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 8 3996
70 % 2 10 3105
50 % 2 10 3047
40 % 2 10 2995
30 % 2 10 2811
Entity #2 | Chains: B,E
PROPANEDIOL DEHYDRATASE protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 3445
95 % 2 8 4228 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 8 4258
70 % 2 8 4190
50 % 2 8 4030
40 % 2 8 3851
30 % 2 8 3583
Entity #3 | Chains: G,M
PROPANEDIOL DEHYDRATASE protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 3487
95 % 2 8 4268 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 2 8 4298
70 % 2 8 4228
50 % 2 8 4063
40 % 2 8 3887
30 % 2 8 3617

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures