Sequence Similarity Clusters for the Entities in PDB 1EGJ

Entity #1 | Chains: A
CYTOKINE RECEPTOR COMMON BETA CHAIN PRECURSOR protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45644
95 % 1 2 34145
90 % 1 2 32657
70 % 1 2 29135
50 % 1 2 24913
40 % 1 2 21952
30 % 1 2 18574
Entity #2 | Chains: L
ANTIBODY (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58877
95 % 25 39 754 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.5
PDBFlex
90 % 53 89 167
70 % 1295 1841 2
50 % 3157 4537 1
40 % 3157 4537 1
30 % 3696 5342 1
Entity #3 | Chains: H
ANTIBODY (HEAVY CHAIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58330
95 % 1 1 40979
90 % 1 1 39108
70 % 1524 2197 1
50 % 3158 4537 1
40 % 3158 4537 1
30 % 3697 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.