Sequence Similarity Clusters for the Entities in PDB 1EGD

Entity #1 | Chains: A,B,C,D
MEDIUM CHAIN ACYL-COA DEHYDROGENASE protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7778
95 % 2 6 2317 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 2 6 2382
70 % 5 9 1685
50 % 5 9 1725
40 % 24 31 509
30 % 44 61 241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.