Sequence Similarity Clusters for the Entities in PDB 1EFV

Entity #1 | Chains: A
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19357
95 % 1 4 17219 Flexibility: Medium
Max RMSD: 8.6, Avg RMSD: 3.1
PDBFlex
90 % 1 4 16881
70 % 1 4 15718
50 % 1 5 10064
40 % 1 5 9165
30 % 9 16 2516
Entity #2 | Chains: B
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39184
95 % 1 4 18196 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.3
PDBFlex
90 % 1 4 17824
70 % 1 4 16555
50 % 1 5 10352
40 % 1 5 9400
30 % 9 17 2307

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures