Sequence Similarity Clusters for the Entities in PDB 1EFV

Entity #1 | Chains: A
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19644
95 % 1 4 17453 Flexibility: Medium
Max RMSD: 8.6, Avg RMSD: 3.1
PDBFlex
90 % 1 4 17106
70 % 1 4 15915
50 % 1 5 10196
40 % 1 5 9279
30 % 9 16 2546
Entity #2 | Chains: B
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39659
95 % 1 4 18437 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.3
PDBFlex
90 % 1 4 18057
70 % 1 4 16757
50 % 1 5 10487
40 % 1 5 9518
30 % 9 17 2333

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures