Sequence Similarity Clusters for the Entities in PDB 1EFV

Entity #1 | Chains: A
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18977
95 % 1 4 16925 Flexibility: Medium
Max RMSD: 8.6, Avg RMSD: 3.1
PDBFlex
90 % 1 4 16595
70 % 1 4 15467
50 % 1 5 9898
40 % 1 5 9016
30 % 9 16 2477
Entity #2 | Chains: B
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38539
95 % 1 4 17886 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.3
PDBFlex
90 % 1 4 17528
70 % 1 4 16293
50 % 1 5 10183
40 % 1 5 9250
30 % 7 13 2953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures