Sequence Similarity Clusters for the Entities in PDB 1EFV

Entity #1 | Chains: A
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20038
95 % 1 4 18171 Flexibility: Medium
Max RMSD: 8.6, Avg RMSD: 3.1
PDBFlex
90 % 1 4 17499
70 % 1 4 16390
50 % 1 5 11138
40 % 1 5 9825
30 % 9 16 2544
Entity #2 | Chains: B
ELECTRON TRANSFER FLAVOPROTEIN protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19314
95 % 1 4 17626 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.4
PDBFlex
90 % 1 4 17197
70 % 1 4 15939
50 % 1 5 10915
40 % 1 5 9824
30 % 9 17 2330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures