Sequence Similarity Clusters for the Entities in PDB 1EFU

Entity #1 | Chains: A,C
ELONGATION FACTOR TU protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 36 784
95 % 12 39 975 Flexibility: Medium
Max RMSD: 12.3, Avg RMSD: 4.0
PDBFlex
90 % 12 39 1008
70 % 22 68 463
50 % 24 70 491
40 % 24 70 532
30 % 34 96 404
Entity #2 | Chains: B,D
ELONGATION FACTOR TS protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 4483
95 % 5 7 5287 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 5 7 5316
70 % 5 7 5204
50 % 5 7 4969
40 % 5 7 4692
30 % 5 7 4301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures