Sequence Similarity Clusters for the Entities in PDB 1EFU

Entity #1 | Chains: A,C
ELONGATION FACTOR TU protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 36 770
95 % 12 39 958 Flexibility: Medium
Max RMSD: 12.3, Avg RMSD: 4.0
PDBFlex
90 % 12 39 992
70 % 22 68 441
50 % 24 70 480
40 % 24 70 521
30 % 34 96 393
Entity #2 | Chains: B,D
ELONGATION FACTOR TS protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 4369
95 % 5 7 5165 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 5 7 5188
70 % 5 7 5084
50 % 5 7 4869
40 % 5 7 4603
30 % 5 7 4217

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures