Sequence Similarity Clusters for the Entities in PDB 1EFU

Entity #1 | Chains: A,C
ELONGATION FACTOR TU protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 35 781
95 % 11 36 1038 Flexibility: Medium
Max RMSD: 12.3, Avg RMSD: 3.8
PDBFlex
90 % 11 36 1056
70 % 21 65 433
50 % 23 67 494
40 % 23 67 530
30 % 32 92 388
Entity #2 | Chains: B,D
ELONGATION FACTOR TS protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 4122
95 % 5 7 4899 Flexibility: Medium
Max RMSD: 18.0, Avg RMSD: 4.0
PDBFlex
90 % 5 7 4920
70 % 5 7 4845
50 % 5 7 4655
40 % 5 7 4405
30 % 5 7 4045

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.