Sequence Similarity Clusters for the Entities in PDB 1EFR

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT ALPHA protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 29 300
95 % 12 41 277
90 % 12 41 289
70 % 16 59 166
50 % 18 71 167
40 % 18 71 182
30 % 18 71 199
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT BETA protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 40 205
95 % 12 42 278
90 % 12 42 290
70 % 18 72 138
50 % 18 72 168
40 % 18 72 183
30 % 18 72 200
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 39 878
95 % 12 39 1186
90 % 12 39 1213
70 % 12 41 1183
50 % 12 41 1242
40 % 16 65 627
30 % 16 65 619
Entity #4 | Chains: Q
EFRAPEPTIN C protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.