Sequence Similarity Clusters for the Entities in PDB 1EFR

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT ALPHA protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 29 249
95 % 12 41 243
90 % 12 41 252
70 % 16 56 156
50 % 18 65 161
40 % 18 65 176
30 % 18 65 190
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT BETA protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 40 180
95 % 12 42 244
90 % 12 42 253
70 % 18 66 135
50 % 18 66 162
40 % 18 66 177
30 % 18 66 191
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 39 772
95 % 12 39 1071
90 % 12 39 1093
70 % 12 41 1085
50 % 12 41 1133
40 % 16 59 591
30 % 16 59 599
Entity #4 | Chains: Q
EFRAPEPTIN C protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.