Sequence Similarity Clusters for the Entities in PDB 1EFR

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT ALPHA protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 29 275
95 % 12 41 264
90 % 12 41 273
70 % 16 59 164
50 % 18 71 161
40 % 18 71 178
30 % 18 71 193
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT BETA protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 40 197
95 % 12 42 265
90 % 12 42 274
70 % 18 72 135
50 % 18 72 162
40 % 18 72 179
30 % 18 72 194
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 39 837
95 % 12 39 1142
90 % 12 39 1171
70 % 12 41 1144
50 % 12 41 1200
40 % 16 65 604
30 % 16 65 601
Entity #4 | Chains: Q
EFRAPEPTIN C protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.