Sequence Similarity Clusters for the Entities in PDB 1EFQ

Entity #1 | Chains: A
KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN) protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70328
95 % 3 9 5401 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 9 5428
70 % 22 193 75
50 % 41 312 23
40 % 141 956 5
30 % 154 1085 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures