Sequence Similarity Clusters for the Entities in PDB 1EFP

Entity #1 | Chains: A,C
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36359
95 % 1 1 28557 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 27574
70 % 1 1 24913
50 % 3 5 9863
40 % 3 5 8986
30 % 9 13 2927
Entity #2 | Chains: B,D
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38479
95 % 1 1 29761 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 28727
70 % 1 1 25911
50 % 3 5 10147
40 % 3 5 9219
30 % 9 13 2940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.