Sequence Similarity Clusters for the Entities in PDB 1EFP

Entity #1 | Chains: A,C
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37616
95 % 1 1 29489 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 28449
70 % 1 1 25657
50 % 3 5 10196
40 % 3 5 9279
30 % 11 16 2546
Entity #2 | Chains: B,D
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39785
95 % 1 1 30719 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 29623
70 % 1 1 26669
50 % 3 5 10487
40 % 3 5 9518
30 % 11 17 2333

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures