Sequence Similarity Clusters for the Entities in PDB 1EFP

Entity #1 | Chains: A,C
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41010
95 % 1 1 35335 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 33763
70 % 1 1 30063
50 % 3 5 11138
40 % 3 5 9825
30 % 11 16 2544
Entity #2 | Chains: B,D
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40259
95 % 1 1 33950 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32473
70 % 1 1 28990
50 % 3 5 10915
40 % 3 5 9824
30 % 11 17 2330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures