Sequence Similarity Clusters for the Entities in PDB 1EFP

Entity #1 | Chains: A,C
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37111
95 % 1 1 29101 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 28079
70 % 1 1 25337
50 % 3 5 10048
40 % 3 5 9149
30 % 11 16 2512
Entity #2 | Chains: B,D
PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39257
95 % 1 1 30323 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 29250
70 % 1 1 26348
50 % 3 5 10335
40 % 3 5 9385
30 % 11 17 2300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures