Sequence Similarity Clusters for the Entities in PDB 1EFN

Entity #1 | Chains: A,C
FYN TYROSINE KINASE protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48694
95 % 8 15 2365 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 8 15 2426
70 % 32 49 746
50 % 36 66 545
40 % 132 285 120
30 % 506 1038 9
Entity #2 | Chains: B,D
HIV-1 NEF PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43889
95 % 1 5 6448 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 5 6430
70 % 5 11 2974
50 % 7 14 2304
40 % 7 14 2291
30 % 7 14 2187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.