Sequence Similarity Clusters for the Entities in PDB 1EEZ

Entity #1 | Chains: A,D
HLA-A2.1 MHC CLASS I (HEAVY CHAIN) protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 146 195 50
95 % 190 244 55
90 % 226 284 33
70 % 492 644 7
50 % 493 649 7
40 % 522 691 11
30 % 570 807 14
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN (LIGHT CHAIN) protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 436 558 2
95 % 469 601 3
90 % 475 610 4
70 % 609 837 5
50 % 619 857 5
40 % 619 857 9
30 % 619 857 13
Entity #3 | Chains: C,F
GP2 PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.