Sequence Similarity Clusters for the Entities in PDB 1EEX

Entity #1 | Chains: A,L
PROPANEDIOL DEHYDRATASE protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4105
95 % 1 8 4453 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 8 4495
70 % 1 10 3370
50 % 1 10 3294
40 % 1 10 3179
30 % 1 10 2937
Entity #2 | Chains: B,E
PROPANEDIOL DEHYDRATASE protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4106
95 % 1 8 4454 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 8 4496
70 % 1 8 4386
50 % 1 8 4223
40 % 1 8 3996
30 % 1 8 3633
Entity #3 | Chains: G,M
PROPANEDIOL DEHYDRATASE protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4137
95 % 1 8 4483 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 8 4525
70 % 1 8 4410
50 % 1 8 4243
40 % 1 8 4013
30 % 1 8 3647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures