Sequence Similarity Clusters for the Entities in PDB 1EEX

Entity #1 | Chains: A,L
PROPANEDIOL DEHYDRATASE protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 2196
95 % 3 11 2328 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 11 2519
70 % 3 13 2117
50 % 3 13 2153
40 % 3 13 2182
30 % 3 13 2188
Entity #2 | Chains: B,E
PROPANEDIOL DEHYDRATASE protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3767
95 % 1 8 4567 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 8 4888
70 % 1 8 4904
50 % 1 8 4737
40 % 1 8 4369
30 % 1 8 4444
Entity #3 | Chains: G,M
PROPANEDIOL DEHYDRATASE protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4105
95 % 1 8 4905 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 8 4954
70 % 1 8 4892
50 % 1 8 4728
40 % 1 8 4621
30 % 1 8 4436

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures