Sequence Similarity Clusters for the Entities in PDB 1EER

Entity #1 | Chains: A
ERYTHROPOIETIN protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63663
95 % 1 3 23791 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 3 23002
70 % 1 3 20972
50 % 1 3 18145
40 % 1 3 16175
30 % 1 3 13830
Entity #2 | Chains: B,C
ERYTHROPOIETIN RECEPTOR protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39964
95 % 1 9 2842 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 1 9 2886
70 % 1 9 2852
50 % 1 9 2807
40 % 1 9 2762
30 % 1 9 2588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures