Sequence Similarity Clusters for the Entities in PDB 1EER

Entity #1 | Chains: A
ERYTHROPOIETIN protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27973
95 % 1 3 24521 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 3 23702
70 % 1 3 21544
50 % 1 3 18520
40 % 1 3 16378
30 % 1 3 13729
Entity #2 | Chains: B,C
ERYTHROPOIETIN RECEPTOR protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37049
95 % 1 9 3003 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 1 9 3055
70 % 1 9 3011
50 % 1 9 2969
40 % 1 9 2889
30 % 1 9 2677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures