Sequence Similarity Clusters for the Entities in PDB 1EEQ

Entity #1 | Chains: A,B
KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN) protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21043
95 % 1 9 5497 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 9 5531
70 % 13 215 66
50 % 22 319 21
40 % 24 363 27
30 % 276 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures