Sequence Similarity Clusters for the Entities in PDB 1EE5

Entity #1 | Chains: A
KARYOPHERIN ALPHA protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11773
95 % 8 10 4004 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 8 10 4058
70 % 8 10 3977
50 % 93 105 442
40 % 95 109 462
30 % 96 110 448
Entity #2 | Chains: B
NUCLEOPLASMIN protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures