Sequence Similarity Clusters for the Entities in PDB 1EE5

Entity #1 | Chains: A
KARYOPHERIN ALPHA protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10252
95 % 8 10 3739 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 8 10 3789
70 % 8 10 3733
50 % 86 98 446
40 % 88 102 460
30 % 88 102 457
Entity #2 | Chains: B
NUCLEOPLASMIN protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures