Sequence Similarity Clusters for the Entities in PDB 1EE4

Entity #1 | Chains: A,B
KARYOPHERIN ALPHA protein, length: 423 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10107
95 % 3 10 3680 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 3 10 3733
70 % 3 10 3681
50 % 61 97 444
40 % 63 101 457
30 % 63 101 456
Entity #2 | Chains: C,D,E,F
MYC PROTO-ONCOGENE PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.