Sequence Similarity Clusters for the Entities in PDB 1EE4

Entity #1 | Chains: A,B
KARYOPHERIN ALPHA protein, length: 423 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10315
95 % 3 10 3770 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 3 10 3821
70 % 3 10 3766
50 % 62 98 447
40 % 64 102 464
30 % 64 102 459
Entity #2 | Chains: C,D,E,F
MYC PROTO-ONCOGENE PROTEIN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures