Sequence Similarity Clusters for the Entities in PDB 1EDY

Entity #1 | Chains: A,B
ALPHA 1-MACROGLOBULIN protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33936
95 % 1 1 29150 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 27990
70 % 1 1 25212
50 % 2 3 12863
40 % 2 3 11540
30 % 2 3 9802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures