Sequence Similarity Clusters for the Entities in PDB 1EDX

Entity #1 | Chains: A
RHODOPSIN protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75205
95 % 1 1 52285
90 % 1 1 49576
70 % 1 1 43390
50 % 1 1 36993
40 % 1 1 32573
30 % 1 1 27561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures