Sequence Similarity Clusters for the Entities in PDB 1EDX

Entity #1 | Chains: A
RHODOPSIN protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63307
95 % 1 1 51455
90 % 1 1 48792
70 % 1 1 42694
50 % 1 1 36211
40 % 1 1 31686
30 % 1 1 26492

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures