Sequence Similarity Clusters for the Entities in PDB 1EDH

Entity #1 | Chains: A,B
E-CADHERIN protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 5207
95 % 3 13 2744 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 3 13 2797
70 % 5 16 2196
50 % 8 35 892
40 % 8 40 775
30 % 8 40 768

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures