Sequence Similarity Clusters for the Entities in PDB 1ED8

Entity #1 | Chains: A,B
ALKALINE PHOSPHATASE protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 26 843
95 % 8 48 470 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 8 48 504
70 % 8 48 544
50 % 8 48 582
40 % 8 48 623
30 % 15 63 513

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures