Sequence Similarity Clusters for the Entities in PDB 1ED3

Entity #1 | Chains: A,D
CLASS I MAJOR HISTOCOMPATIBILITY ANTIGEN RT1-AA protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24925
95 % 2 2 20904
90 % 2 2 20337
70 % 502 649 7
50 % 503 654 7
40 % 537 701 11
30 % 585 817 14
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6916
95 % 4 6 7437
90 % 4 6 7404
70 % 625 847 5
50 % 635 867 5
40 % 635 867 9
30 % 635 867 13
Entity #3 | Chains: C,F
PEPTIDE MTF-E (13N3E) protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.