Sequence Similarity Clusters for the Entities in PDB 1ED1

Entity #1 | Chains: A
GAG POLYPROTEIN protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44639
95 % 1 2 33557 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 32079
70 % 1 5 13497
50 % 1 5 11984
40 % 1 19 2521
30 % 1 19 2393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.