Sequence Similarity Clusters for the Entities in PDB 1ED1

Entity #1 | Chains: A
GAG POLYPROTEIN protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45941
95 % 1 2 34469 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 32915
70 % 1 5 13882
50 % 1 5 12318
40 % 1 19 2608
30 % 1 19 2464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures