Sequence Similarity Clusters for the Entities in PDB 1EC6

Entity #1 | Chains: C,D
20-MER RNA HAIRPIN rna, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
RNA-BINDING PROTEIN NOVA-2 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47412
95 % 1 1 35408
90 % 1 1 33836
70 % 1 1 30113
50 % 1 1 25741
40 % 1 1 22702
30 % 1 1 19228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.