Sequence Similarity Clusters for the Entities in PDB 1EBW

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 182 349 5
95 % 211 408 4 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 340 656 3
70 % 355 680 5
50 % 360 706 5
40 % 364 716 8
30 % 366 718 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures