Sequence Similarity Clusters for the Entities in PDB 1EBP

Entity #1 | Chains: A,B
EPO RECEPTOR protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7497
95 % 5 9 2931 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.5
PDBFlex
90 % 5 9 2974
70 % 5 9 2937
50 % 5 9 2891
40 % 5 9 2840
30 % 5 9 2662
Entity #2 | Chains: C,D
EPO MIMETICS PEPTIDE 1 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25753
95 % 2 2 21921
90 % 2 2 21276
70 % 2 2 19517
50 % 2 2 16946
40 % 2 2 15114
30 % 2 2 12962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures