Sequence Similarity Clusters for the Entities in PDB 1EBD

Entity #1 | Chains: A,B
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 455 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31730
95 % 1 1 25688 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 24847
70 % 1 1 22668
50 % 1 1 19621
40 % 23 27 538
30 % 94 123 160
Entity #2 | Chains: C
DIHYDROLIPOAMIDE ACETYLTRANSFERASE protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29363
95 % 1 3 24335
90 % 1 3 23549
70 % 1 3 21524
50 % 1 3 18679
40 % 1 3 16637
30 % 1 3 14275

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.