Sequence Similarity Clusters for the Entities in PDB 1EBD

Entity #1 | Chains: A,B
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 455 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36665
95 % 1 1 31216 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29912
70 % 1 1 26835
50 % 1 1 19681
40 % 32 36 456
30 % 129 162 140
Entity #2 | Chains: C
DIHYDROLIPOAMIDE ACETYLTRANSFERASE protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27176
95 % 1 3 23530
90 % 1 3 22770
70 % 1 3 20732
50 % 1 3 17842
40 % 4 6 6056
30 % 4 6 5312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures