Sequence Similarity Clusters for the Entities in PDB 1EBD

Entity #1 | Chains: A,B
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 455 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32704
95 % 1 1 26491 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 25593
70 % 1 1 23225
50 % 1 1 20059
40 % 26 30 530
30 % 98 127 160
Entity #2 | Chains: C
DIHYDROLIPOAMIDE ACETYLTRANSFERASE protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 30277
95 % 1 3 25115
90 % 1 3 24279
70 % 1 3 22069
50 % 1 3 19109
40 % 1 3 17013
30 % 1 3 14596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures