Sequence Similarity Clusters for the Entities in PDB 1EAQ

Entity #1 | Chains: A,B
RUNT-RELATED TRANSCRIPTION FACTOR 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11606
95 % 1 13 2450 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 1 13 2523
70 % 1 13 2519
50 % 1 13 2501
40 % 1 13 2454
30 % 1 13 2298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures