Sequence Similarity Clusters for the Entities in PDB 1EAP

Entity #1 | Chains: A
IGG2B-KAPPA 17E8 FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60810
95 % 4 8 7071 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 5 9 6385
70 % 910 2327 1
50 % 1864 4713 1
40 % 1864 4713 1
30 % 2108 5567 1
Entity #2 | Chains: B
IGG2B-KAPPA 17E8 FAB (HEAVY CHAIN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60405
95 % 1 1 42375
90 % 1 1 40349
70 % 899 2280 2
50 % 1865 4713 1
40 % 1865 4713 1
30 % 2109 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.