Sequence Similarity Clusters for the Entities in PDB 1EAK

Entity #1 | Chains: A,B,C,D
72 KDA TYPE IV COLLAGENASE protein, length: 421 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 16135
95 % 1 1 14697
90 % 1 1 14417
70 % 1 1 13508
50 % 2 2 10479
40 % 2 2 9519
30 % 2 2 8316
Entity #2 | Chains: P,R
INHIBITOR PEPTIDE protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.