Sequence Similarity Clusters for the Entities in PDB 1EAK

Entity #1 | Chains: A,B,C,D
72 KDA TYPE IV COLLAGENASE protein, length: 421 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17781
95 % 1 1 16160 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 1 1 15850
70 % 1 1 14806
50 % 2 2 11402
40 % 2 2 10346
30 % 2 2 9024
Entity #2 | Chains: P,R
INHIBITOR PEPTIDE protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.