Sequence Similarity Clusters for the Entities in PDB 1EA4

Entity #1 | Chains: A,B,D,E,F,G,H,J,K,L
TRANSCRIPTIONAL REPRESSOR COPG protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 5447
95 % 3 3 4454
90 % 3 3 4475
70 % 3 3 4406
50 % 3 3 4240
40 % 3 3 4044
30 % 3 3 3731
Entity #2 | Chains: U,W,Y
DNA (5'-D(*TP*AP*AP*CP*CP*GP*TP*GP *CP*AP*CP*TP*CP*AP*AP*TP*GP*CP*AP*AP*TP*C)-3') dna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: V,X,Z
DNA(5'-D(*AP*GP*AP*TP*TP*GP*CP*AP*TP *TP*GP*AP*GP*TP*GP*CP*AP*CP*GP*GP*TP*T)-3') dna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.