Sequence Similarity Clusters for the Entities in PDB 1E9Z

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39704
95 % 1 2 30546
90 % 1 2 29470
70 % 1 2 26525
50 % 3 4 4562
40 % 3 4 4334
30 % 3 4 3983
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51573
95 % 1 2 26094 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 25218
70 % 3 4 4577
50 % 47 49 930
40 % 47 49 958
30 % 47 49 933

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3QGA 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
2 3QGK 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
3 1E9Z 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details
4 1E9Y 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details