Sequence Similarity Clusters for the Entities in PDB 1E9Z

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36546
95 % 1 2 29920 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29553
70 % 1 2 26697
50 % 3 4 5146
40 % 3 4 5020
30 % 3 4 4792
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56873
95 % 1 2 30742 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 37671
70 % 3 4 5327
50 % 51 53 982
40 % 51 53 1023
30 % 51 53 1061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3QGA 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
2 3QGK 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
3 1E9Z 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details
4 1E9Y 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details