Sequence Similarity Clusters for the Entities in PDB 1E9Z

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43249
95 % 1 2 28022 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 26953
70 % 1 2 24339
50 % 3 4 4718
40 % 3 4 4445
30 % 3 4 4008
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47012
95 % 1 2 36243 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 34612
70 % 3 4 5041
50 % 48 50 952
40 % 48 50 973
30 % 48 50 962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3QGA 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
2 3QGK 1 A, D, G, J, M, P Fusion of urease beta and gamma subunits 217 3.5.1.5 | Details
3 1E9Z 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details
4 1E9Y 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details