Sequence Similarity Clusters for the Entities in PDB 1E9Z

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34872
95 % 1 2 28826 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 27807
70 % 1 2 25230
50 % 3 4 5134
40 % 3 4 5010
30 % 3 4 4787
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56399
95 % 1 2 30483 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 34695
70 % 3 4 5249
50 % 50 52 993
40 % 50 52 1039
30 % 50 52 1069

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures