Sequence Similarity Clusters for the Entities in PDB 1E9Z

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34764
95 % 1 2 28760 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 27723
70 % 1 2 25148
50 % 3 4 5088
40 % 3 4 5002
30 % 3 4 5020
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56231
95 % 1 2 30393 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 28479
70 % 3 4 5227
50 % 49 51 1007
40 % 49 51 1036
30 % 49 51 1081

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures