Sequence Similarity Clusters for the Entities in PDB 1E9Y

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34506
95 % 2 2 29774 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 28574
70 % 2 2 25668
50 % 4 4 5000
40 % 4 4 4704
30 % 4 4 4220
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52398
95 % 2 2 38351 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 36564
70 % 4 4 5392
50 % 50 51 1011
40 % 50 51 1028
30 % 50 51 1010

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5OL4 3 C Urease subunit alpha 1474 3.5.1.5 | Details
2 4AC7 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
3 5G4H 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
4 4CEX 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
5 4CEU 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
6 4UBP 3 C PROTEIN (UREASE (CHAIN C)) 1474 3.5.1.5 | Details
7 5A6T 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
8 4EP8 1 C Urease subunit alpha 548 3.5.1.5 | Details
9 1EJX 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
10 1UBP 3 C UREASE 1474 3.5.1.5 | Details
11 4EPD 1 C Urease subunit alpha 548 3.5.1.5 | Details
12 5FSD 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
13 4EPB 1 C Urease subunit alpha 548 3.5.1.5 | Details
14 1EJW 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
15 6G48 3 C Urease subunit alpha 1474
16 1IE7 3 C UREASE ALPHA SUBUNIT 1474 3.5.1.5 | Details
17 3UBP 3 C PROTEIN (UREASE ALPHA SUBUNIT) 1474 3.5.1.5 | Details
18 2UBP 3 C PROTEIN (UREASE ALPHA SUBUNIT) 1474 3.5.1.5 | Details
19 1EJR 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
20 5FSE 3 C UREASE SUBUNIT ALPHA 1474 3.5.1.5 | Details
21 4EPE 1 C Urease subunit alpha 548 3.5.1.5 | Details
22 1FWC 3 C UREASE PH 8.5 548 3.5.1.5 | Details
23 1FWA 3 C UREASE PH 7.5 548 3.5.1.5 | Details
24 1FWB 3 C UREASE PH 6.5 548 3.5.1.5 | Details
25 1FWD 3 C UREASE PH 9.4 548 3.5.1.5 | Details
26 1FWI 3 C UREASE 548 3.5.1.5 | Details
27 1FWF 3 C UREASE 548 3.5.1.5 | Details
28 1EJT 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
29 1FWG 3 C UREASE 548 3.5.1.5 | Details
30 1FWH 3 C UREASE 548 3.5.1.5 | Details
31 1EJS 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
32 2KAU 3 C UREASE (ALPHA CHAIN) 548 3.5.1.5 | Details
33 1EJU 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
34 1A5M 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
35 1S3T 3 C Urease alpha subunit 1474 3.5.1.5 | Details
36 1FWE 3 C UREASE INHIBITOR BOUND 548 3.5.1.5 | Details
37 1FWJ 3 C UREASE 548 3.5.1.5 | Details
38 1A5K 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
39 1A5L 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
40 1A5N 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
41 1KRA 3 C UREASE 548 3.5.1.5 | Details
42 1EJV 1 C UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
43 1EF2 1 A UREASE ALPHA SUBUNIT 548 3.5.1.5 | Details
44 1KRB 3 C UREASE 548 3.5.1.5 | Details
45 1KRC 3 C UREASE 548 3.5.1.5 | Details
46 1A5O 3 C UREASE (ALPHA SUBUNIT) 548 3.5.1.5 | Details
47 3QGA 2 C, F, I, L, O, R Urease subunit beta 2 217 3.5.1.5 | Details
48 3QGK 2 C, F, I, L, O, R Urease subunit beta 2 217 3.5.1.5 | Details
49 1E9Z 2 B UREASE SUBUNIT BETA 210 3.5.1.5 | Details
50 1E9Y 2 B UREASE SUBUNIT BETA 210 3.5.1.5 | Details
51 4Z42 3 C, F, I, L Urease subunit alpha 630 3.5.1.5 | Details