Sequence Similarity Clusters for the Entities in PDB 1E9Y

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34259
95 % 2 2 29550 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 28362
70 % 2 2 25499
50 % 4 4 4967
40 % 4 4 4680
30 % 4 4 4194
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52036
95 % 2 2 38068 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 36295
70 % 4 4 5352
50 % 50 51 1003
40 % 50 51 1025
30 % 50 51 1004

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1E9Z 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details
2 1E9Y 1 A UREASE SUBUNIT ALPHA 210 3.5.1.5 | Details