Sequence Similarity Clusters for the Entities in PDB 1E9Y

Entity #1 | Chains: A
UREASE SUBUNIT ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42787
95 % 2 2 27747
90 % 2 2 26702
70 % 2 2 24119
50 % 4 4 4669
40 % 4 4 4392
30 % 4 4 3967
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62557
95 % 2 2 35870 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 2 2 34266
70 % 4 4 4981
50 % 49 50 943
40 % 49 50 963
30 % 49 50 953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures