Sequence Similarity Clusters for the Entities in PDB 1E9N

Entity #1 | Chains: A,B
DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 1470
95 % 13 20 1282 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.8
PDBFlex
90 % 13 20 1313
70 % 13 21 1240
50 % 14 22 1262
40 % 24 47 665
30 % 28 52 609

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.