Sequence Similarity Clusters for the Entities in PDB 1E9L

Entity #1 | Chains: A
YM1 SECRETORY PROTEIN protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 34630
95 % 2 2 27653 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 26706
70 % 2 2 24172
50 % 46 79 425
40 % 55 88 417
30 % 67 100 355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures