Sequence Similarity Clusters for the Entities in PDB 1E8O

Entity #1 | Chains: A,C
SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 10340
95 % 4 6 7667
90 % 4 6 7625
70 % 4 6 7371
50 % 4 6 6811
40 % 4 6 6330
30 % 4 6 5643
Entity #2 | Chains: B,D
SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 10281
95 % 3 5 10288
90 % 3 5 10150
70 % 3 5 9617
50 % 3 5 8738
40 % 3 5 7998
30 % 5 10 3844
Entity #3 | Chains: E
7SL RNA rna, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.