Sequence Similarity Clusters for the Entities in PDB 1E8M

Entity #1 | Chains: A
PROLYL ENDOPEPTIDASE protein, length: 710 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 24 2206
95 % 9 29 2102 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 9 29 2158
70 % 9 29 2164
50 % 9 29 2168
40 % 10 49 858
30 % 11 55 699

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures